BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008E04SP1|AL425872
(787 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1359 1560 0.0
>3x_Contig1359
Length = 7536
Score = 1560 bits (787), Expect = 0.0
Identities = 787/787 (100%)
Strand = Plus / Minus
Query: 1 gatcttgctaaatgtgttgagagtatcaacatcaaatcacaactcggacatactgtcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4285 gatcttgctaaatgtgttgagagtatcaacatcaaatcacaactcggacatactgtcggt 4226
Query: 61 agagagcaaaccttagttttgcaattgggacagacgtaaccaccatggactagagtcgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4225 agagagcaaaccttagttttgcaattgggacagacgtaaccaccatggactagagtcgaa 4166
Query: 121 tggcaagcacaaaatgatggtgtgtcctcaaatactctggtagggaatcccatcttaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4165 tggcaagcacaaaatgatggtgtgtcctcaaatactctggtagggaatcccatcttaacc 4106
Query: 181 aaggtgaaccctttgttcactttgctcaccggtaacggtgtcactgcacttgtgaatagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4105 aaggtgaaccctttgttcactttgctcaccggtaacggtgtcactgcacttgtgaatagt 4046
Query: 241 tccttaaaatgatgatcgttcaatataatcccataatatgagttatctccataattcgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4045 tccttaaaatgatgatcgttcaatataatcccataatatgagttatctccataattcgtc 3986
Query: 301 tgcttacacaactctttgcaaacggagacttgagcagatagaccaataacttttgctcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3985 tgcttacacaactctttgcaaacggagacttgagcagatagaccaataacttttgctcta 3926
Query: 361 atattctcatgtaccaatgagccaatcgtttgatgaatatcacctggatctgtagttgat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3925 atattctcatgtaccaatgagccaatcgtttgatgaatatcacctggatctgtagttgat 3866
Query: 421 aatgcaccgaaaacgatgagtacttctctagtacaatgcgctggaacatgaagtaagaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3865 aatgcaccgaaaacgatgagtacttctctagtacaatgcgctggaacatgaagtaagaga 3806
Query: 481 cctctagccatctctaaagcattttgtaaagaagcgttcccctttggttcttgcctacga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3805 cctctagccatctctaaagcattttgtaaagaagcgttcccctttggttcttgcctacga 3746
Query: 541 agcatctttaaagcatcgatatgttcttgagggttaccactgacctgcgatattagctga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3745 agcatctttaaagcatcgatatgttcttgagggttaccactgacctgcgatattagctga 3686
Query: 601 gctaaaccatcacgcataacaactacaccaatttgagaaataggattttgatcaaaatac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3685 gctaaaccatcacgcataacaactacaccaatttgagaaataggattttgatcaaaatac 3626
Query: 661 tcatgaataaagtctacagcatattgtactgtcattgcatatctattaggtcgcaaatct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3625 tcatgaataaagtctacagcatattgtactgtcattgcatatctattaggtcgcaaatct 3566
Query: 721 ttttccatcattgcttcgctacaatccaataccaagataagggttctgataatacctctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3565 ttttccatcattgcttcgctacaatccaataccaagataagggttctgataatacctctt 3506
Query: 781 tgatacg 787
|||||||
Sbjct: 3505 tgatacg 3499
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5090
Number of Sequences: 1807
Number of extensions: 5090
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 787
length of database: 10,358,551
effective HSP length: 16
effective length of query: 771
effective length of database: 10,329,639
effective search space: 7964151669
effective search space used: 7964151669
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)